Publications

Search for publications at Department of Computer Science

Below you find a complete list of publications published and edited by scientists at the Department of Computer Science

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Skovsgaard, A. & Jensen, C. S. (2015). Finding Top-k Relevant Groups of Spatial Web Objects. V L D B Journal, 24(4), 537-555. https://doi.org/10.1007/s00778-015-0388-z

Skovsgaard, A. (2014). Indexing, Query Processing, and Clustering of Spatio-Temporal Text Objects. Department of Computer Science, Aarhus University.

Skovsgaard, A., Sidlauskas, D. & Jensen, C. S. (2014). A Clustering Approach to the Discovery of Points of Interest from Geo-Tagged Microblog Posts. In J. E. Guerrero (Ed.), 15th IEEE International Conference on Mobile Data Management (MDM), 2014 : Proceedings (pp. 178-189 (vol. 1)). IEEE Computer Society Press. https://doi.org/10.1109/MDM.2014.28

Skovsgaard, A. & Jensen, C. S. (2014). Top-k point of interest retrieval using standard indexes. In Y. Huang & M. Schneider (Eds.), Proceedings of the 22nd ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, SIGSPATIAL '14 (pp. 173-182 ). Association for Computing Machinery. https://doi.org/10.1145/2666310.2666399

Skovsgaard, A. & Jensen, C. S. (2015). Scalable Spatio-Textual Region Querying in Key-Value Stores. Paper presented at ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, Dallas, United States. http://sigspatial2014.sigspatial.org/

Skovgaard, C., Thomsen, J. R., Verdezoto, N. & Vestergaard, D. (2015). DogPulse: Augmenting the Coordination of Dog Walking through an Ambient Awareness System at Home. In S. Nanayakkara & E. Y-L. Do (Eds.), AH '15, Proceedings of the 6th Augmented Human International Conference: SIGCHI ACM. (pp. 41-44). Association for Computing Machinery. https://doi.org/10.1145/2735711.2735825

Skovenborg, E. (2005). Perceptual Features of Music and Speech - Measured by Listening Experiments, and Computer Modelled from Signal Analysis. Daimi PhD Dissertation No. PD-05-1

Skov, L. (2017). Methods for analyzing genetic variation in modern and archaic humans.

Skorstensgaard, L., Devriese, D. & Birkedal, L. (2021). StkTokens: Enforcing well-bracketed control flow and stack encapsulation using linear capabilities. Journal of Functional Programming, 31, Article e9. https://doi.org/10.1017/S095679682100006X

Skorstengaard, L., Devriese, D. & Birkedal, L. (2018). Reasoning About a Machine with Local Capabilities: Provably Safe Stack and Return Pointer Management. In A. Ahmed (Ed.), Programming Languages and Systems - 27th European Symposium on Programming, ESOP 2018, Held as Part of the European Joint Conferences on Theory and Practice of Software, ETAPS 2018, Proceedings (Vol. 10801, pp. 475-501). Springer VS. https://doi.org/10.1007/978-3-319-89884-1_17

Skorstengaard, L. (2019). Formal Reasoning about Capability Machines. Aarhus University.

Skorstengaard, L., Devriese, D. & Birkedal, L. (2019). Reasoning About a Machine with Local Capabilities: Provably Safe Stack and Return Pointer Management. A C M Transactions on Programming Languages and Systems, 41(4), Article 5. https://doi.org/10.1145/3363519

Skorstengaard, L., Devriese, D. & Birkedal, L. (2019). StkTokens: Enforcing Well-Bracketed Control Flow and Stack Encapsulation Using Linear Capabilities. Proceedings of the ACM on Programming Languages, 3(POPL), Article 19. https://doi.org/10.1145/3290332

Skorstengaard, L., Devriese, D. & Birkedal, L. (2020). Reasoning about a Machine with Local Capabilities: Provably Safe Stack and Return Pointer Management. ACM Transactions on Programming Languages and Systems, 42(1), Article 5. https://doi.org/10.1145/3363519

Sitchinava, N. & Zeh, N. (2012). A parallel buffer tree. In Proceedings of the 24th ACM Symposium on Parallelism in Algorithms and Architectures, SPAA (pp. 214-223). Association for Computing Machinery. https://doi.org/10.1145/2312005.2312046

Simonsen, M., Mailund, T. & Pedersen, C. S. (2008). Rapid Neighbour-Joining. In Proceedings of the 8th International Workshop on Algorithms in Bioinformatics (WABI) (pp. 113-122)

Simonsen, M., Mailund, T. & Pedersen, C. S. (2009). Building very large neighbour-joining trees. Poster session presented at 17th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 8th European Conference on Computational Biology (ECCB), Stockholm, Sweden.

Simonsen, M., Mailund, T. & Pedersen, C. N. S. (2010). Building Very Large Neighbour-Joining Trees. In A. Fred, J. Filipe & H. Gamboa (Eds.), BIOINFORMATICS 2010: Proceedings of the First International Conference on Bioinformatics (part of the 3rd International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2010) (pp. 26). Institute for Systems and Technologies of Information, Control and Communication.

Simonsen, M., Sand, A., Mailund, T. & Pedersen, C. N. S. (2010). Using the Power of Modern Processors in Bioformatics. Poster session presented at Conference on IT research at AU, Århus, Denmark.

Simonsen, M., Mailund, T. & Pedersen, C. N. S. (2011). Inference of Large Phylogenies Using Neighbour-Joining. Biomedical Engineering Systems and Technologies, 127(5), 334-344. https://doi.org/10.1007/978-3-642-18472-7_26

Simonsen, M. & Pedersen, C. N. S. (2011). Rapid Computation of Distance Estimators from Nucleotide and Amino Acid Alignments. In Proceedings of the 26th Annual ACM Symposium on Applied Computing Association for Computing Machinery.

Simonsen, M., Thomsen, R., Christensen, M. H. & Pedersen, C. N. S. (2011). GPU-Accelerated High-Accuracy Molecular Docking using Guided Differential Evolution. In GECCO'11 Proceedings of the 13th annual conference on Genetic and evolutionary computation (pp. 1803-1810). Association for Computing Machinery. https://doi.org/10.1145/2001576.2001818

Simonsen, M. (2011). Efficient algorithms for tree reconstruction and prediction of molecular interactions. Department of Computer Science, Aarhus University.

Simonsen, M., Christensen, M. H., Thomsen, R. & Pedersen, C. N. S. (2013). GPU-Accelerated High-Accuracy Molecular Docking using Guided Differential Evolution. In S. tsutsui & P. Collet (Eds.), Massively Parallel Evolutionary Computation on GPGPUs Springer Publishing Company.

Simmons , R. J. & Zerny, I. (2013). A logical correspondence between natural semantics and abstract machines. In R. Peña & T. Schrijvers (Eds.), Proceedings of the 15th Symposium on Principles and Practice of Declarative Programming, PPDP '13 (pp. 109-119 ). Association for Computing Machinery. https://doi.org/10.1145/2505879.2505899

Simkin, M. (2020). Alice, Bits, and Bob.

Simkin, M., Siniscalchi, L. & Yakoubov, S. (2022). On Sufficient Oracles for Secure Computation with Identifiable Abort. In C. Galdi & S. Jarecki (Eds.), Security and Cryptography for Networks - 13th International Conference, SCN 2022, Proceedings (pp. 494-515). Springer. https://doi.org/10.1007/978-3-031-14791-3_22

Silvestri, C., Lettich, F., Orlando, S. & Jensen, C. S. (2014). GPU-based computing of repeated range queries over moving objects. In Proceedings - 2014 22nd Euromicro International Conference on Parallel, Distributed, and Network-Based Processing, PDP 2014 (pp. 640-647). Article 6787342 IEEE Computer Society Press. https://doi.org/10.1109/PDP.2014.27

Silva, G., Lyle, P. J. & Silva, C. (2020). Local Perspectives for Sharing Economy Design on a Remote Tourist Island. In Proceedings of the 32nd Australian Computer-Human Interaction Conference, OzCHI 2020 (pp. 368-378). Association for Computing Machinery. https://doi.org/10.1145/3441000.3441058

Sillasen, M., Daugbjerg, P., Krogh, L. B. & Nielsen, K. (2018). Engineering i skolen - Vidensgrundlag. VIA University College. https://www.ucviden.dk/portal/da/publications/engineering-i-skolen(2d8a5ff9-3ab5-4a10-965f-46ebe403919d).html

Sieczkowski, F., Svendsen, K., Birkedal, L. & Pichon-Pharabod, J. (2015). A separation logic for fictional sequential consistency. In J. Vitek (Ed.), Programming Languages and Systems : 24th European Symposiumon Programming, ESOP 2015 held as part of the European Joint Conferences on Theory and Practice of Software, ETAPS 2015 (pp. 736-761). Springer. https://doi.org/10.1007/978-3-662-46669-8_30

Sieczkowski, F., Bizjak, A. & Birkedal, L. (2015). ModuRes: A Coq Library for Modular Reasoning About Concurrent Higher-Order Imperative Programming Languages. In C. Urban & X. Zhang (Eds.), Interactive Theorem Proving: 6th International Conference, ITP 2015, Nanjing, China, August 24-27, 2015, Proceedings (pp. 375-390). Springer. https://doi.org/10.1007/978-3-319-22102-1_25

Sidorenco, N., Oechsner, S. & Spitters, B. (2021). Formal security analysis of MPC-in-the-head zero-knowledge protocols. In Proceedings - 2021 IEEE 34th Computer Security Foundations Symposium, CSF 2021 (pp. 607-620). IEEE. https://doi.org/10.1109/CSF51468.2021.00050

Šidlauskas, D., Jensen, C. S. & Šaltenis , S. (2012). A comparison of the use of virtual versus physical snapshots for supporting update-intensive workloads. In Proceedings of the Eighth International Workshop on Data Management on New Hardware: DaMoN '12 (pp. 1-8). Association for Computing Machinery. https://doi.org/10.1145/2236584.2236585

Šidlauskas, D., Šaltenis, S. & Jensen, C. S. (2012). Parallel main-memory indexing for moving-object query and update workloads. In Proceedings of the 2012 ACM SIGMOD International Conference on Management of Data (pp. 37-48 ). Association for Computing Machinery. https://doi.org/10.1145/2213836.2213842

Sidlauskas, D., Ross, K. A., Jensen, C. S. & Saltenis, S. (2011). Thread-Level Parallel Indexing of Update Intensive Moving-Object Workloads. Lecture Notes in Computer Science, 6849, 186-204. https://doi.org/10.1007/978-3-642-22922-0_12

Sidlauskas, D., Saltenis, S. & Jensen, C. S. (2014). Processing of extreme moving-object update and query workloads in main memory. V L D B Journal, 23(5), 817-841. https://doi.org/10.1007/s00778-014-0353-2

Sidlauskas, D. & Jensen, C. S. (2014). Spatial joins in main memory: Implementation matters! Proceedings of the VLDB Endowment, 8(1), 97-100. http://www.vldb.org/pvldb/vol8/p97-sidlauskas.pdf

Sidenmark, L., Clarke, C., Zhang, X., Phu, J. & Gellersen, H. (2020). Outline Pursuits: Gaze-assisted Selection of Occluded Objects in Virtual Reality. In CHI 2020 - Proceedings of the 2020 CHI Conference on Human Factors in Computing Systems Article 3376438 Association for Computing Machinery. https://doi.org/10.1145/3313831.3376438

Sidenmark, L., Potts, D., Bapisch, B. & Gellersen, H. (2021). Radi-Eye: Hands-Free Radial Interfaces for 3D Interaction using Gaze-Activated Head-Crossing. In CHI 2021 - Proceedings of the 2021 CHI Conference on Human Factors in Computing Systems: Making Waves, Combining Strengths Article 740 Association for Computing Machinery. https://doi.org/10.1145/3411764.3445697

Sidenmark, L., Lystbæk, M. N. & Gellersen, H. (2023). GE-Simulator: An Open-Source Tool for Simulating Real-Time Errors for HMD-based Eye Trackers. In S. N. Spencer (Ed.), Proceedings of the 2023 Symposium on Eye Tracking Research and Applications (pp. 1-6). Article 8 Association for Computing Machinery. https://doi.org/10.1145/3588015.3588417

Shin, Y. (2018). External Memory Algorithms for Massive Terrains and Polygons. Aarhus Universitet.

Sheng, Q. Z., Wang, G., Jensen, C. S. & Xu, G. (Eds.) (2012). Web Technologies and Applications: 14th Asia-Pacific Web Conference, APWeb 2012, Kunming, China, April 11-13, 2012. Proceedings. Springer. Lecture Notes in Computer Science Vol. 7235 https://doi.org/10.1007/978-3-642-29253-8

Sheng, Q. Z., Wang, G. & Jensen, C. S. (2012). Message from the Program Chairs. In Web Technologies and Applications: 14th Asia-Pacific Web Conference, APWeb 2012, Kunming, China, April 11-13, 2012. Proceedings (pp. VI). Springer. https://doi.org/10.1007/978-3-642-29253-8

Shapiro, D., Buscher, M., Ørbæk, P., Mogensen, P. H. & Christensen, M. (2005). Spatial Computing and Ambient Collaborative Environments for Design and Construction. In Proceedings of the 3rd international conference on innovation in architecture, engineering and construction (pp. 199-210)

Shao, J., Tan, Y., Gao, L., Yang, Q., Plant, C. & Assent, I. (2019). Synchronization-based clustering on evolving data stream. Information Sciences, 501, 573-587. https://doi.org/10.1016/j.ins.2018.09.035

Shaik, I. & van de Pol, J. (2022). Classical Planning as QBF without Grounding. In A. Kumar, S. Thiebaux, P. Varakantham & W. Yeoh (Eds.), Proceedings of the 32nd International Conference on Automated Planning and Scheduling, ICAPS 2022 (pp. 329-337). AAAI Press. https://doi.org/10.1609/icaps.v32i1.19817

S. Fitzgerald, J., Gorm Larsen, P., Tjell, S. & Verhoef, M. (2007). Validation Support for Distributed Real-Time Embedded Systems in VDM++. In Proceedings of the Tenth IEEE International Symposium on High Assurance Software Engineering (HASE 2007) (pp. 331-340). IEEE Computer Society Press.

Sergey, I. & Clark, D. (2012). A correspondence between type checking via reduction and type checking via evaluation. Information Processing Letters, 112(1-2), 13-20. https://doi.org/10.1016/j.ipl.2011.10.008

Sergey, I., Midtgaard, J. & Clarke, D. (2012). Calculating Graph Algorithms for Dominance and Shortest Path. Lecture Notes in Computer Science, 7342, 132-156. https://doi.org/10.1007/978-3-642-31113-0_8

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Revised 17.04.2023

Marianne Dammand Iversen

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